Researchers help develop technique for assessing, reducing risk of future stroke
Stanford School of Medicine News Jul 07, 2017
Using health records, Stanford researchers developed an algorithm for scoring the risk of a stroke patient experiencing atrial fibrillation.
Which stroke patients are at risk for the condition has been hard to predict without costly 24/7 monitoring for the hundreds of thousands of people who have a first stroke every year.
Now, a team led by researchers at the Stanford University School of Medicine and Santa Clara Valley Medical Center has used electronic medical records to predict the likelihood of a person experiencing atrial fibrillation after either of two kinds of strokes: a cryptogenic stroke or a transient ischemic attack.
A paper describing their findings was published online June 28 in the journal Cardiology.
The senior authors are Nigam Shah, MBBS, PhD, associate professor of biomedical data science at Stanford, and Susan Zhao, MD, of Valley Medical Center. Stanford graduate student Albee Ling and Valley Medical Center internist Calvin Kwong, MD, share lead authorship.
ÂThis work resulted from a unique collaboration, said Shah, Âwhere a need for risk stratification was identified by Dr. Susan Zhao, and followed up jointly by an informatics student and a clinical fellow to derive a risk estimate for a population for which we donÂt have good scoring methods. The team did a retrospective cohort study using data from thousands of stroke patients from StanfordÂs Translational Research Integrated Database Environment. Of the 9,589 stroke patients in the database, 482 of them, or 5 percent, went on to be diagnosed with atrial fibrillation.
The team had already developed a text–processing pipeline for analyzing clinical data and clinical–diagnosis coding. Using that pipeline, the team extracted information from clinical notes, flagging, for example, phrases such as Âruled out stroke and classifying data according to whether it referred to the patient or came from a family history section. The result was a list of biomedical facts about each patient  including age, body mass index and so on. Then, by ranking the clinical attributes of patients whose medical records indicated they went on to be diagnosed with atrial fibrillation, the team was able to assemble a set of seven risk factors that, when combined, predicted which stroke patients were the most likely to develop the condition and should be monitored after hospitalization. The risk factors  age, obesity, congestive heart failure, hypertension, coronary artery disease, peripheral vascular disease and disease of the heart valves  are the basis of a scoring system that assigns patients to one of three risk groups.
ÂThe scoring system we developed is simple to use and the results could help physicians tailor treatment to individual patients, said Ling.
It can help physicians decide which patients to monitor. Once itÂs known that patients have a high risk of atrial fibrillation, they can wear a heart monitor at home to see if they actually are experiencing bouts of atrial fibrillation and then, if they are, treated with the appropriate drugs to try to prevent a second stroke.
ÂOur system needs to be further validated in studies using other independent data sources, said Ling. She said she expects that clinicians and researchers will further validate and improve the scoring system and that, hopefully, it will one day be adopted in everyday practice. ÂOn the other hand, there will surely be more clinical studies conducted using electronic health records, not just at Stanford but in other medical institutions, as well, she added.
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Which stroke patients are at risk for the condition has been hard to predict without costly 24/7 monitoring for the hundreds of thousands of people who have a first stroke every year.
Now, a team led by researchers at the Stanford University School of Medicine and Santa Clara Valley Medical Center has used electronic medical records to predict the likelihood of a person experiencing atrial fibrillation after either of two kinds of strokes: a cryptogenic stroke or a transient ischemic attack.
A paper describing their findings was published online June 28 in the journal Cardiology.
The senior authors are Nigam Shah, MBBS, PhD, associate professor of biomedical data science at Stanford, and Susan Zhao, MD, of Valley Medical Center. Stanford graduate student Albee Ling and Valley Medical Center internist Calvin Kwong, MD, share lead authorship.
ÂThis work resulted from a unique collaboration, said Shah, Âwhere a need for risk stratification was identified by Dr. Susan Zhao, and followed up jointly by an informatics student and a clinical fellow to derive a risk estimate for a population for which we donÂt have good scoring methods. The team did a retrospective cohort study using data from thousands of stroke patients from StanfordÂs Translational Research Integrated Database Environment. Of the 9,589 stroke patients in the database, 482 of them, or 5 percent, went on to be diagnosed with atrial fibrillation.
The team had already developed a text–processing pipeline for analyzing clinical data and clinical–diagnosis coding. Using that pipeline, the team extracted information from clinical notes, flagging, for example, phrases such as Âruled out stroke and classifying data according to whether it referred to the patient or came from a family history section. The result was a list of biomedical facts about each patient  including age, body mass index and so on. Then, by ranking the clinical attributes of patients whose medical records indicated they went on to be diagnosed with atrial fibrillation, the team was able to assemble a set of seven risk factors that, when combined, predicted which stroke patients were the most likely to develop the condition and should be monitored after hospitalization. The risk factors  age, obesity, congestive heart failure, hypertension, coronary artery disease, peripheral vascular disease and disease of the heart valves  are the basis of a scoring system that assigns patients to one of three risk groups.
ÂThe scoring system we developed is simple to use and the results could help physicians tailor treatment to individual patients, said Ling.
It can help physicians decide which patients to monitor. Once itÂs known that patients have a high risk of atrial fibrillation, they can wear a heart monitor at home to see if they actually are experiencing bouts of atrial fibrillation and then, if they are, treated with the appropriate drugs to try to prevent a second stroke.
ÂOur system needs to be further validated in studies using other independent data sources, said Ling. She said she expects that clinicians and researchers will further validate and improve the scoring system and that, hopefully, it will one day be adopted in everyday practice. ÂOn the other hand, there will surely be more clinical studies conducted using electronic health records, not just at Stanford but in other medical institutions, as well, she added.
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