• Profile
Close

Epigenetic study of esophageal carcinoma based on methylation, gene integration and weighted correlation network analysis

OncoTargets and Therapy May 28, 2021

Xu Y, Wang N, Liu R, et al. - Researchers sought to determine potential molecular markers of esophageal carcinoma that may assist its diagnosis as well as management. They used The Cancer Genome Atlas database, to obtain mRNA and DNA methylation data. To ascertain essential modules and hub genes, Weighted Gene Co-Expression Network Analysis (WGCNA) was employed. They discovered 2408 differentially expressed genes (DEGs) and 5134 differentially methylated sites. The optimal module, in the WGCNA analysis, was the royal blue module. Additionally, ESRRG, MFSD4, CCKBR, ATP4B, ESRRB, ATP4A, CCKAR and B3GAT1, included as hub genes in the module, were also differentially methylated genes and DEGs. The likely diagnostic gene biomarkers for esophageal carcinoma include CCKAR, MFSD4 and ESRRG. There was a significant correlation between high expression of MFSD4 and patient survival. Reduced gene expression levels of ATP4B, B3GAT1, CCKBR and ESRRG were revealed in immunohistochemistry analysis of esophageal carcinoma tissues, which was in line with the bioinformatics findings. Thus, these discovered molecular markers may aid the diagnosis as well as management of esophageal carcinoma.

Go to Original
Only Doctors with an M3 India account can read this article. Sign up for free or login with your existing account.
4 reasons why Doctors love M3 India
  • Exclusive Write-ups & Webinars by KOLs

  • Nonloggedininfinity icon
    Daily Quiz by specialty
  • Nonloggedinlock icon
    Paid Market Research Surveys
  • Case discussions, News & Journals' summaries
Sign-up / Log In
x
M3 app logo
Choose easy access to M3 India from your mobile!


M3 instruc arrow
Add M3 India to your Home screen
Tap  Chrome menu  and select "Add to Home screen" to pin the M3 India App to your Home screen
Okay